The VALIDATE Network - Vaccine development for complex intracellular neglected pathogens
European Bioinformatics Institute: Single cell RNA-seq analysis using R
Venue: European Bioinformatics Institute (EMBL-EBI) - Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, United Kingdom
Course dates: 1 - 5 February 2021
This course covers the analysis of scRNA-seq data using R and command line tools. Participants will be guided through both droplet-based and plate-based scRNA-seq analysis pipelines from raw reads to cell clusters. They will explore and interpret data using R as well as the Human Cell & Single Cell Expression Atlases. Finally participants will put their knowledge into practice through a group challenge on the final two days.